PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10015618m
Common NameEUTSA_v10015618mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family ARR-B
Protein Properties Length: 134aa    MW: 15388.9 Da    PI: 8.47
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10015618mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.59.4e-11781022751
          G2-like  27 AtPktilelmkvkgLtlehvkSHLQ 51 
                       +Pk+i +lm+v+gLt+++v+SHLQ
  Thhalv10015618m  78 SVPKKIQKLMNVEGLTRADVASHLQ 102
                      58*********************** PP

2Response_reg35.36.1e-13366163
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHH CS
     Response_reg  1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellk 63
                     vl vdD+p+ +e l+ ++   +y +v++++d+++ale+l+e+   +Dl++ D +mp+ d ++ll+
  Thhalv10015618m  3 VLAVDDNPTYLEKLKDLMLLCKY-HVTTTTDPKKALEMLRENFyiFDLVIADADMPDTDVFKLLE 66
                     799********************.***************999999***************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521728.11E-15176IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.4E-14176No hitNo description
PROSITE profilePS5011017.6882118IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.6E-8366IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.58E-10477No hitNo description
Gene3DG3DSA:1.10.10.601.6E-878103IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-879103IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005622Cellular Componentintracellular
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MRVLAVDDNP TYLEKLKDLM LLCKYHVTTT TDPKKALEML RENFYIFDLV IADADMPDTD  60
VFKLLEIGLD MNLPVIISVP KKIQKLMNVE GLTRADVASH LQIRKDSTNK RKEENHVTLH  120
VPENGKRSKN RRE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006401131.11e-93hypothetical protein EUTSA_v10015618mg
SwissprotQ9FGT78e-27ARR18_ARATH; Two-component response regulator ARR18
TrEMBLV4LFU91e-93V4LFU9_EUTSA; Uncharacterized protein
STRINGAT5G58080.12e-24(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2719123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.15e-28response regulator 18